STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH59179.1Intein N-terminal splicing region/RHS repeat-associated core domain-containing protein. (2246 aa)    
Predicted Functional Partners:
SDH59150.1
Concanavalin A-like lectin/glucanases superfamily protein.
 
 
  0.940
SDH59192.1
Hypothetical protein.
       0.737
SDG10444.1
Hypothetical protein.
  
     0.716
SDG10422.1
O-antigen ligase.
  
    0.641
SDG79131.1
DivIVA domain-containing protein.
  
     0.591
SDG10243.1
Ig-like domain-containing protein.
  
     0.521
SDF66730.1
Type VII secretion integral membrane protein EccD.
   
    0.508
SDF39233.1
Hypothetical protein.
  
     0.479
SDF78182.1
CARDB protein.
  
     0.476
SDG51129.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
  
     0.470
Your Current Organism:
Lechevalieria fradiae
NCBI taxonomy Id: 200378
Other names: AS 4.3506, CGMCC 4.3506, DSM 45099, JCM 14205, L. fradiae, Lechevalieria fradiae Zhang et al. 2007, strain Z6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.