STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDD83_2166PSP domain-containing protein. (598 aa)    
Predicted Functional Partners:
CDD83_4816
RRM domain-containing protein.
   
 0.999
CDD83_7275
SF3b1 domain-containing protein.
   
 0.999
CDD83_36
CPSF_A domain-containing protein.
   
 0.999
CDD83_2407
Splicing factor subunit; Belongs to the SF3B5 family.
    
 0.998
CDD83_10593
RRM domain-containing protein.
    
 0.998
CDD83_1911
Lysophospholipase.
    
 0.996
CDD83_2951
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.995
CDD83_9362
SF3A2 domain-containing protein.
   
 0.995
CDD83_5983
Matrin-type domain-containing protein.
   
 0.995
CDD83_7271
Uncharacterized protein.
   
 0.994
Your Current Organism:
Cordyceps sp. RAO2017
NCBI taxonomy Id: 2004951
Other names: C. sp. RAO-2017, Cordyceps sp. RAO-2017
Server load: low (16%) [HD]