STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDD83_3960Uncharacterized protein. (117 aa)    
Predicted Functional Partners:
CDD83_2396
MFAP1 domain-containing protein.
   
 0.968
CDD83_5101
Uncharacterized protein.
   
 0.959
CDD83_11171
Uncharacterized protein.
   
 0.955
CDD83_4612
Uncharacterized protein.
   
  0.920
CDD83_9138
SKIP_SNW domain-containing protein.
   
 0.917
CDD83_5007
Uncharacterized protein.
   
  0.915
CDD83_6629
Uncharacterized protein.
    
  0.912
CDD83_2372
Uncharacterized protein.
    
  0.912
CDD83_8760
U-box domain-containing protein.
    
  0.912
CDD83_2546
RRM domain-containing protein.
   
 0.909
Your Current Organism:
Cordyceps sp. RAO2017
NCBI taxonomy Id: 2004951
Other names: C. sp. RAO-2017, Cordyceps sp. RAO-2017
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