STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDD80_1536Uncharacterized protein. (1484 aa)    
Predicted Functional Partners:
CDD80_6869
Uncharacterized protein.
  
 0.999
CDD80_4855
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.999
CDD80_778
Trafficking protein particle complex subunit BET3.
    
 0.999
CDD80_1441
Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.
    
 0.999
CDD80_1097
Uncharacterized protein.
    
 0.999
CDD80_6912
Uncharacterized protein.
    
 0.999
CDD80_4438
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.998
CDD80_7590
Uncharacterized protein.
    
 0.993
CDD80_3238
Uncharacterized protein.
     
 0.988
CDD80_2881
ATP-grasp domain-containing protein.
    
 0.988
Your Current Organism:
Ophiocordyceps camponotirufipedis
NCBI taxonomy Id: 2004952
Other names: O. camponoti-rufipedis, Ophiocordyceps camponoti-rufipedis, Ophiocordyceps camponoti-rufipedis H.C. Evans & D.P. Hughes, 2011
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