STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001689405_00010annotation not available (1312 aa)    
Predicted Functional Partners:
GCA_001689405_00011
annotation not available
     0.948
GCA_001689405_01618
annotation not available
    
  0.865
GCA_001689405_01814
annotation not available
    
  0.862
GCA_001689405_00670
annotation not available
   
  0.861
GCA_001689405_02356
annotation not available
  
 0.812
GCA_001689405_01952
annotation not available
    
  0.710
GCA_001689405_00669
annotation not available
   
  0.674
GCA_001689405_00814
annotation not available
  
 
 0.645
GCA_001689405_01318
annotation not available
   
 
  0.611
GCA_001689405_00067
annotation not available
    
 0.566
Your Current Organism:
Homeothermus arabinoxylanisolvens
NCBI taxonomy Id: 2005518
Other names: Bacteroidales bacterium M4, C. Homeothermus arabinoxylanisolvens, Candidatus Homeothermus arabinoxylanisolvens
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.