STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DES48_103231Unannotated protein. (233 aa)    
Predicted Functional Partners:
DES48_103230
Unannotated protein.
 0.983
DES48_10248
Unannotated protein.
 
 
 
 0.967
DES48_10479
Unannotated protein.
 0.949
DES48_10563
Unannotated protein.
 
0.942
DES48_101347
Unannotated protein.
 0.934
DES48_101235
Unannotated protein.
 0.915
DES48_1054
Unannotated protein.
 
 
 
  0.908
DES48_11086
Unannotated protein.
 
 0.908
DES48_11312
Unannotated protein.
 0.894
DES48_10346
Unannotated protein.
 0.875
Your Current Organism:
Paraliobacillus ryukyuensis
NCBI taxonomy Id: 200904
Other names: DSM 15140, IAM 15001, JCM 21472, NBRC 100001, NRIC 0520, P. ryukyuensis, Paraliobacillus ryukyuensis Ishikawa et al. 2003, strain O15-7
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