STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DES48_103157Unannotated protein. (326 aa)    
Predicted Functional Partners:
DES48_10918
Unannotated protein.
 
 0.999
DES48_10917
Unannotated protein.
 
 0.999
DES48_10648
Unannotated protein.
  
 0.985
DES48_106129
Unannotated protein.
  
 0.985
DES48_103158
Unannotated protein.
 
  
 0.919
DES48_103225
Unannotated protein; Belongs to the mannose-6-phosphate isomerase type 1 family.
 
  
 0.909
DES48_102474
Unannotated protein.
  
 
 0.907
DES48_102288
Unannotated protein.
  
 
 0.877
DES48_103209
Unannotated protein.
  
 
 0.869
nagB
Unannotated protein; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
  
 
 0.865
Your Current Organism:
Paraliobacillus ryukyuensis
NCBI taxonomy Id: 200904
Other names: DSM 15140, IAM 15001, JCM 21472, NBRC 100001, NRIC 0520, P. ryukyuensis, Paraliobacillus ryukyuensis Ishikawa et al. 2003, strain O15-7
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