Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES48_101402 | DES48_10291 | GCA_900168775_01714 | GCA_900168775_00363 | Unannotated protein. | Unannotated protein. | 0.744 |
DES48_101402 | DES48_10293 | GCA_900168775_01714 | GCA_900168775_00365 | Unannotated protein. | Unannotated protein. | 0.410 |
DES48_101402 | DES48_10334 | GCA_900168775_01714 | GCA_900168775_03287 | Unannotated protein. | Unannotated protein. | 0.859 |
DES48_101402 | DES48_104162 | GCA_900168775_01714 | GCA_900168775_02351 | Unannotated protein. | Unannotated protein; Belongs to the RimK family. | 0.744 |
DES48_101402 | argB | GCA_900168775_01714 | GCA_900168775_00426 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.516 |
DES48_101402 | leuB | GCA_900168775_01714 | GCA_900168775_01393 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.877 |
DES48_101402 | odhA | GCA_900168775_01714 | GCA_900168775_01134 | Unannotated protein. | Unannotated protein; E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2). | 0.843 |
DES48_101402 | secD | GCA_900168775_01714 | GCA_900168775_02403 | Unannotated protein. | Unannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.783 |
DES48_10291 | DES48_101402 | GCA_900168775_00363 | GCA_900168775_01714 | Unannotated protein. | Unannotated protein. | 0.744 |
DES48_10291 | DES48_10292 | GCA_900168775_00363 | GCA_900168775_00364 | Unannotated protein. | Unannotated protein; Belongs to the DNA photolyase family. | 0.530 |
DES48_10291 | DES48_10293 | GCA_900168775_00363 | GCA_900168775_00365 | Unannotated protein. | Unannotated protein. | 0.517 |
DES48_10291 | DES48_10334 | GCA_900168775_00363 | GCA_900168775_03287 | Unannotated protein. | Unannotated protein. | 0.613 |
DES48_10291 | DES48_10356 | GCA_900168775_00363 | GCA_900168775_03312 | Unannotated protein. | Unannotated protein; Belongs to the glutathione peroxidase family. | 0.559 |
DES48_10291 | DES48_104162 | GCA_900168775_00363 | GCA_900168775_02351 | Unannotated protein. | Unannotated protein; Belongs to the RimK family. | 0.761 |
DES48_10291 | argB | GCA_900168775_00363 | GCA_900168775_00426 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.569 |
DES48_10291 | leuB | GCA_900168775_00363 | GCA_900168775_01393 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.530 |
DES48_10291 | odhA | GCA_900168775_00363 | GCA_900168775_01134 | Unannotated protein. | Unannotated protein; E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2). | 0.550 |
DES48_10291 | secD | GCA_900168775_00363 | GCA_900168775_02403 | Unannotated protein. | Unannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.589 |
DES48_10292 | DES48_10291 | GCA_900168775_00364 | GCA_900168775_00363 | Unannotated protein; Belongs to the DNA photolyase family. | Unannotated protein. | 0.530 |
DES48_10292 | DES48_10293 | GCA_900168775_00364 | GCA_900168775_00365 | Unannotated protein; Belongs to the DNA photolyase family. | Unannotated protein. | 0.800 |
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