Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES48_10124 | DES48_101451 | GCA_900168775_02409 | GCA_900168775_01660 | Unannotated protein. | Unannotated protein. | 0.910 |
DES48_10124 | DES48_102200 | GCA_900168775_02409 | GCA_900168775_00474 | Unannotated protein. | Unannotated protein. | 0.560 |
DES48_10124 | DES48_102203 | GCA_900168775_02409 | GCA_900168775_00477 | Unannotated protein. | Unannotated protein; Belongs to the 5'-nucleotidase family. | 0.428 |
DES48_10124 | DES48_102204 | GCA_900168775_02409 | GCA_900168775_00478 | Unannotated protein. | Unannotated protein. | 0.746 |
DES48_10124 | DES48_1063 | GCA_900168775_02409 | GCA_900168775_00822 | Unannotated protein. | Unannotated protein. | 0.430 |
DES48_10124 | DES48_10662 | GCA_900168775_02409 | GCA_900168775_00883 | Unannotated protein. | Unannotated protein. | 0.533 |
DES48_10124 | GCA_900168775_00604 | GCA_900168775_02409 | GCA_900168775_00604 | Unannotated protein. | Unannotated protein. | 0.819 |
DES48_10124 | cinA | GCA_900168775_02409 | GCA_900168775_01637 | Unannotated protein. | Unannotated protein; Belongs to the CinA family. | 0.853 |
DES48_10124 | guaA | GCA_900168775_02409 | GCA_900168775_02700 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.776 |
DES48_10124 | guaB | GCA_900168775_02409 | GCA_900168775_00033 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.781 |
DES48_101451 | DES48_10124 | GCA_900168775_01660 | GCA_900168775_02409 | Unannotated protein. | Unannotated protein. | 0.910 |
DES48_101451 | DES48_102204 | GCA_900168775_01660 | GCA_900168775_00478 | Unannotated protein. | Unannotated protein. | 0.622 |
DES48_101451 | DES48_1063 | GCA_900168775_01660 | GCA_900168775_00822 | Unannotated protein. | Unannotated protein. | 0.605 |
DES48_101451 | DES48_10662 | GCA_900168775_01660 | GCA_900168775_00883 | Unannotated protein. | Unannotated protein. | 0.499 |
DES48_101451 | GCA_900168775_00604 | GCA_900168775_01660 | GCA_900168775_00604 | Unannotated protein. | Unannotated protein. | 0.435 |
DES48_101451 | cinA | GCA_900168775_01660 | GCA_900168775_01637 | Unannotated protein. | Unannotated protein; Belongs to the CinA family. | 0.448 |
DES48_102200 | DES48_10124 | GCA_900168775_00474 | GCA_900168775_02409 | Unannotated protein. | Unannotated protein. | 0.560 |
DES48_102200 | DES48_102203 | GCA_900168775_00474 | GCA_900168775_00477 | Unannotated protein. | Unannotated protein; Belongs to the 5'-nucleotidase family. | 0.801 |
DES48_102200 | DES48_102204 | GCA_900168775_00474 | GCA_900168775_00478 | Unannotated protein. | Unannotated protein. | 0.757 |
DES48_102200 | cinA | GCA_900168775_00474 | GCA_900168775_01637 | Unannotated protein. | Unannotated protein; Belongs to the CinA family. | 0.808 |
page 1 of 4