STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900168775_00636Unannotated protein. (229 aa)    
Predicted Functional Partners:
GCA_900168775_00647
Unannotated protein.
  
 
 0.969
GCA_900168775_00632
Unannotated protein.
 
 
 0.948
GCA_900168775_00762
Unannotated protein.
 
 
 0.931
GCA_900168775_00638
Unannotated protein.
  
  
 0.922
GCA_900168775_00631
Unannotated protein.
 
  
 0.873
DES48_103134
Unannotated protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.814
DES48_10555
Unannotated protein.
  
 
 0.812
GCA_900168775_00634
Unannotated protein.
 
  
 0.797
DES48_102369
Unannotated protein.
    
 0.788
GCA_900168775_00637
Unannotated protein.
  
  
 0.785
Your Current Organism:
Paraliobacillus ryukyuensis
NCBI taxonomy Id: 200904
Other names: DSM 15140, IAM 15001, JCM 21472, NBRC 100001, NRIC 0520, P. ryukyuensis, Paraliobacillus ryukyuensis Ishikawa et al. 2003, strain O15-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.