Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES48_101586 | DES48_102162 | GCA_900168775_01525 | GCA_900168775_00437 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein. | 0.696 |
DES48_101586 | DES48_10640 | GCA_900168775_01525 | GCA_900168775_00861 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.674 |
DES48_101586 | DES48_10849 | GCA_900168775_01525 | GCA_900168775_02823 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.681 |
DES48_101586 | GCA_900168775_00610 | GCA_900168775_01525 | GCA_900168775_00610 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein. | 0.850 |
DES48_101586 | prs-2 | GCA_900168775_01525 | GCA_900168775_02952 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.559 |
DES48_101586 | rbsK | GCA_900168775_01525 | GCA_900168775_02839 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.718 |
DES48_101586 | rpiA | GCA_900168775_01525 | GCA_900168775_00683 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.694 |
DES48_101586 | udk | GCA_900168775_01525 | GCA_900168775_02429 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein. | 0.582 |
DES48_102162 | DES48_101586 | GCA_900168775_00437 | GCA_900168775_01525 | Unannotated protein. | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | 0.696 |
DES48_102162 | DES48_102164 | GCA_900168775_00437 | GCA_900168775_00439 | Unannotated protein. | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | 0.851 |
DES48_102162 | DES48_10640 | GCA_900168775_00437 | GCA_900168775_00861 | Unannotated protein. | Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.730 |
DES48_102162 | DES48_10849 | GCA_900168775_00437 | GCA_900168775_02823 | Unannotated protein. | Unannotated protein; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.715 |
DES48_102162 | GCA_900168775_00610 | GCA_900168775_00437 | GCA_900168775_00610 | Unannotated protein. | Unannotated protein. | 0.731 |
DES48_102162 | deoB | GCA_900168775_00437 | GCA_900168775_03466 | Unannotated protein. | Unannotated protein; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.656 |
DES48_102162 | prs-2 | GCA_900168775_00437 | GCA_900168775_02952 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.678 |
DES48_102162 | rbsK | GCA_900168775_00437 | GCA_900168775_02839 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.726 |
DES48_102162 | rpiA | GCA_900168775_00437 | GCA_900168775_00683 | Unannotated protein. | Unannotated protein; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.693 |
DES48_102162 | udk | GCA_900168775_00437 | GCA_900168775_02429 | Unannotated protein. | Unannotated protein. | 0.619 |
DES48_102164 | DES48_102162 | GCA_900168775_00439 | GCA_900168775_00437 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein. | 0.851 |
DES48_102164 | DES48_10640 | GCA_900168775_00439 | GCA_900168775_00861 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.670 |
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