Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES48_101589 | DES48_101643 | GCA_900168775_01522 | GCA_900168775_01471 | Unannotated protein. | Unannotated protein. | 0.801 |
DES48_101589 | DES48_10628 | GCA_900168775_01522 | GCA_900168775_00848 | Unannotated protein. | Unannotated protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | 0.633 |
DES48_101643 | DES48_101589 | GCA_900168775_01471 | GCA_900168775_01522 | Unannotated protein. | Unannotated protein. | 0.801 |
DES48_101643 | DES48_10628 | GCA_900168775_01471 | GCA_900168775_00848 | Unannotated protein. | Unannotated protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | 0.495 |
DES48_101643 | glmU | GCA_900168775_01471 | GCA_900168775_02951 | Unannotated protein. | Unannotated protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.512 |
DES48_101643 | topA | GCA_900168775_01471 | GCA_900168775_01556 | Unannotated protein. | Unannotated protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.470 |
DES48_101643 | topB | GCA_900168775_01471 | GCA_900168775_00501 | Unannotated protein. | Unannotated protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.470 |
DES48_102473 | DES48_10628 | GCA_900168775_00731 | GCA_900168775_00848 | Unannotated protein. | Unannotated protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | 0.510 |
DES48_10626 | DES48_10627 | GCA_900168775_00846 | GCA_900168775_00847 | Unannotated protein. | Unannotated protein; Displays ATPase and GTPase activities. | 0.735 |
DES48_10626 | DES48_10628 | GCA_900168775_00846 | GCA_900168775_00848 | Unannotated protein. | Unannotated protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | 0.782 |
DES48_10626 | whiA | GCA_900168775_00846 | GCA_900168775_00849 | Unannotated protein. | Unannotated protein; Involved in cell division and chromosome segregation. | 0.669 |
DES48_10627 | DES48_10626 | GCA_900168775_00847 | GCA_900168775_00846 | Unannotated protein; Displays ATPase and GTPase activities. | Unannotated protein. | 0.735 |
DES48_10627 | DES48_10628 | GCA_900168775_00847 | GCA_900168775_00848 | Unannotated protein; Displays ATPase and GTPase activities. | Unannotated protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | 0.955 |
DES48_10627 | glmU | GCA_900168775_00847 | GCA_900168775_02951 | Unannotated protein; Displays ATPase and GTPase activities. | Unannotated protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.616 |
DES48_10627 | whiA | GCA_900168775_00847 | GCA_900168775_00849 | Unannotated protein; Displays ATPase and GTPase activities. | Unannotated protein; Involved in cell division and chromosome segregation. | 0.894 |
DES48_10628 | DES48_101589 | GCA_900168775_00848 | GCA_900168775_01522 | Unannotated protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | Unannotated protein. | 0.633 |
DES48_10628 | DES48_101643 | GCA_900168775_00848 | GCA_900168775_01471 | Unannotated protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | Unannotated protein. | 0.495 |
DES48_10628 | DES48_102473 | GCA_900168775_00848 | GCA_900168775_00731 | Unannotated protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | Unannotated protein. | 0.510 |
DES48_10628 | DES48_10626 | GCA_900168775_00848 | GCA_900168775_00846 | Unannotated protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | Unannotated protein. | 0.782 |
DES48_10628 | DES48_10627 | GCA_900168775_00848 | GCA_900168775_00847 | Unannotated protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | Unannotated protein; Displays ATPase and GTPase activities. | 0.955 |
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