STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DES48_10645Unannotated protein. (327 aa)    
Predicted Functional Partners:
DES48_10646
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.985
DES48_106153
Unannotated protein.
 
 0.926
DES48_1023
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.922
DES48_1025
Unannotated protein.
 
 0.920
DES48_1022
Unannotated protein.
 
 
 0.832
DES48_10664
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.726
DES48_10666
Unannotated protein.
 
  
 0.722
DES48_1024
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.676
dnaX
Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
    
   0.613
DES48_11452
Unannotated protein.
    
   0.613
Your Current Organism:
Paraliobacillus ryukyuensis
NCBI taxonomy Id: 200904
Other names: DSM 15140, IAM 15001, JCM 21472, NBRC 100001, NRIC 0520, P. ryukyuensis, Paraliobacillus ryukyuensis Ishikawa et al. 2003, strain O15-7
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