STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DES48_10666Unannotated protein. (252 aa)    
Predicted Functional Partners:
DES48_10665
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 0.997
DES48_10664
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.990
DES48_10667
Unannotated protein.
 
  
 0.979
DES48_10542
Unannotated protein; Belongs to the ABC transporter superfamily.
 
     
0.897
ecfA-3
Unannotated protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
     
0.750
DES48_10645
Unannotated protein.
 
  
 0.722
DES48_1023
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.681
DES48_10646
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.584
DES48_1024
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.581
DES48_10663
Unannotated protein; Belongs to the UPF0403 family.
       0.474
Your Current Organism:
Paraliobacillus ryukyuensis
NCBI taxonomy Id: 200904
Other names: DSM 15140, IAM 15001, JCM 21472, NBRC 100001, NRIC 0520, P. ryukyuensis, Paraliobacillus ryukyuensis Ishikawa et al. 2003, strain O15-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.