Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES48_103121 | DES48_10476 | GCA_900168775_03377 | GCA_900168775_02267 | Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Unannotated protein; Belongs to the citrate synthase family. | 0.898 |
DES48_103121 | DES48_107100 | GCA_900168775_03377 | GCA_900168775_00989 | Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Unannotated protein. | 0.889 |
DES48_103121 | GCA_900168775_02924 | GCA_900168775_03377 | GCA_900168775_02924 | Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Unannotated protein. | 0.876 |
DES48_103121 | fumC | GCA_900168775_03377 | GCA_900168775_01175 | Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.733 |
DES48_103121 | ldh | GCA_900168775_03377 | GCA_900168775_00859 | Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Unannotated protein; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.729 |
DES48_10476 | DES48_103121 | GCA_900168775_02267 | GCA_900168775_03377 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.898 |
DES48_10476 | DES48_107100 | GCA_900168775_02267 | GCA_900168775_00989 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.906 |
DES48_10476 | GCA_900168775_02924 | GCA_900168775_02267 | GCA_900168775_02924 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.986 |
DES48_10476 | fumC | GCA_900168775_02267 | GCA_900168775_01175 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.818 |
DES48_10476 | ldh | GCA_900168775_02267 | GCA_900168775_00859 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.975 |
DES48_107100 | DES48_103121 | GCA_900168775_00989 | GCA_900168775_03377 | Unannotated protein. | Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.889 |
DES48_107100 | DES48_10476 | GCA_900168775_00989 | GCA_900168775_02267 | Unannotated protein. | Unannotated protein; Belongs to the citrate synthase family. | 0.906 |
DES48_107100 | DES48_107101 | GCA_900168775_00989 | GCA_900168775_00988 | Unannotated protein. | Unannotated protein. | 0.903 |
DES48_107100 | DES48_107102 | GCA_900168775_00989 | GCA_900168775_00987 | Unannotated protein. | Unannotated protein. | 0.887 |
DES48_107100 | DES48_10797 | GCA_900168775_00989 | GCA_900168775_00992 | Unannotated protein. | Unannotated protein; Belongs to the carbamate kinase family. | 0.909 |
DES48_107100 | DES48_10798 | GCA_900168775_00989 | GCA_900168775_00991 | Unannotated protein. | Unannotated protein. | 0.929 |
DES48_107100 | DES48_10799 | GCA_900168775_00989 | GCA_900168775_00990 | Unannotated protein. | Unannotated protein. | 0.962 |
DES48_107100 | GCA_900168775_02924 | GCA_900168775_00989 | GCA_900168775_02924 | Unannotated protein. | Unannotated protein. | 0.999 |
DES48_107100 | fumC | GCA_900168775_00989 | GCA_900168775_01175 | Unannotated protein. | Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.887 |
DES48_107100 | ldh | GCA_900168775_00989 | GCA_900168775_00859 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.910 |
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