STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DES48_10759Unannotated protein. (279 aa)    
Predicted Functional Partners:
DES48_108120
Unannotated protein; Belongs to the sulfur carrier protein TusA family.
  
 0.879
DES48_102460
Unannotated protein.
  
 0.837
DES48_103124
Unannotated protein.
  
 0.837
DES48_102193
Unannotated protein.
  
 
 0.686
DES48_108121
Unannotated protein.
  
 0.649
acpP
Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.583
DES48_10274
Unannotated protein.
  
  
 0.568
DES48_11085
Unannotated protein.
  
 0.565
DES48_101153
Unannotated protein.
  
 0.565
ybeY
Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.550
Your Current Organism:
Paraliobacillus ryukyuensis
NCBI taxonomy Id: 200904
Other names: DSM 15140, IAM 15001, JCM 21472, NBRC 100001, NRIC 0520, P. ryukyuensis, Paraliobacillus ryukyuensis Ishikawa et al. 2003, strain O15-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.