Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES48_101133 | DES48_10591 | GCA_900168775_02514 | GCA_900168775_01212 | Unannotated protein. | Unannotated protein. | 0.439 |
DES48_101133 | DES48_10730 | GCA_900168775_02514 | GCA_900168775_01065 | Unannotated protein. | Unannotated protein. | 0.439 |
DES48_101133 | ftsH | GCA_900168775_02514 | GCA_900168775_02987 | Unannotated protein. | Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.493 |
DES48_101535 | DES48_10591 | GCA_900168775_01576 | GCA_900168775_01212 | Unannotated protein. | Unannotated protein. | 0.582 |
DES48_101535 | DES48_10730 | GCA_900168775_01576 | GCA_900168775_01065 | Unannotated protein. | Unannotated protein. | 0.582 |
DES48_10591 | DES48_101133 | GCA_900168775_01212 | GCA_900168775_02514 | Unannotated protein. | Unannotated protein. | 0.439 |
DES48_10591 | DES48_101535 | GCA_900168775_01212 | GCA_900168775_01576 | Unannotated protein. | Unannotated protein. | 0.582 |
DES48_10591 | DES48_10730 | GCA_900168775_01212 | GCA_900168775_01065 | Unannotated protein. | Unannotated protein. | 0.774 |
DES48_10591 | dnaJ | GCA_900168775_01212 | GCA_900168775_02457 | Unannotated protein. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK [...] | 0.496 |
DES48_10591 | ftsH | GCA_900168775_01212 | GCA_900168775_02987 | Unannotated protein. | Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.478 |
DES48_10591 | grpE | GCA_900168775_01212 | GCA_900168775_02455 | Unannotated protein. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...] | 0.471 |
DES48_10591 | msrA | GCA_900168775_01212 | GCA_900168775_01711 | Unannotated protein. | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.473 |
DES48_10591 | msrA-2 | GCA_900168775_01212 | GCA_900168775_01782 | Unannotated protein. | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.473 |
DES48_10730 | DES48_101133 | GCA_900168775_01065 | GCA_900168775_02514 | Unannotated protein. | Unannotated protein. | 0.439 |
DES48_10730 | DES48_101535 | GCA_900168775_01065 | GCA_900168775_01576 | Unannotated protein. | Unannotated protein. | 0.582 |
DES48_10730 | DES48_10591 | GCA_900168775_01065 | GCA_900168775_01212 | Unannotated protein. | Unannotated protein. | 0.774 |
DES48_10730 | dnaJ | GCA_900168775_01065 | GCA_900168775_02457 | Unannotated protein. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK [...] | 0.483 |
DES48_10730 | ftsH | GCA_900168775_01065 | GCA_900168775_02987 | Unannotated protein. | Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.478 |
DES48_10730 | grpE | GCA_900168775_01065 | GCA_900168775_02455 | Unannotated protein. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...] | 0.455 |
DES48_10730 | msrA | GCA_900168775_01065 | GCA_900168775_01711 | Unannotated protein. | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.473 |
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