Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES48_101613 | DES48_101615 | GCA_900168775_01500 | GCA_900168775_01498 | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Unannotated protein. | 0.497 |
DES48_101613 | lspA | GCA_900168775_01500 | GCA_900168775_01499 | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Unannotated protein; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.925 |
DES48_101615 | DES48_101613 | GCA_900168775_01498 | GCA_900168775_01500 | Unannotated protein. | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.497 |
DES48_101615 | DES48_10365 | GCA_900168775_01498 | GCA_900168775_03320 | Unannotated protein. | Unannotated protein. | 0.509 |
DES48_101615 | DES48_10366 | GCA_900168775_01498 | GCA_900168775_03321 | Unannotated protein. | Unannotated protein. | 0.443 |
DES48_101615 | DES48_106116 | GCA_900168775_01498 | GCA_900168775_00935 | Unannotated protein. | Unannotated protein. | 0.691 |
DES48_101615 | DES48_10617 | GCA_900168775_01498 | GCA_900168775_00836 | Unannotated protein. | Unannotated protein. | 0.572 |
DES48_101615 | DES48_10955 | GCA_900168775_01498 | GCA_900168775_03445 | Unannotated protein. | Unannotated protein. | 0.464 |
DES48_101615 | GCA_900168775_00647 | GCA_900168775_01498 | GCA_900168775_00647 | Unannotated protein. | Unannotated protein. | 0.407 |
DES48_101615 | lspA | GCA_900168775_01498 | GCA_900168775_01499 | Unannotated protein. | Unannotated protein; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.498 |
DES48_10365 | DES48_101615 | GCA_900168775_03320 | GCA_900168775_01498 | Unannotated protein. | Unannotated protein. | 0.509 |
DES48_10365 | DES48_10366 | GCA_900168775_03320 | GCA_900168775_03321 | Unannotated protein. | Unannotated protein. | 0.659 |
DES48_10366 | DES48_101615 | GCA_900168775_03321 | GCA_900168775_01498 | Unannotated protein. | Unannotated protein. | 0.443 |
DES48_10366 | DES48_10365 | GCA_900168775_03321 | GCA_900168775_03320 | Unannotated protein. | Unannotated protein. | 0.659 |
DES48_10366 | DES48_106116 | GCA_900168775_03321 | GCA_900168775_00935 | Unannotated protein. | Unannotated protein. | 0.691 |
DES48_10366 | DES48_10617 | GCA_900168775_03321 | GCA_900168775_00836 | Unannotated protein. | Unannotated protein. | 0.572 |
DES48_106116 | DES48_101615 | GCA_900168775_00935 | GCA_900168775_01498 | Unannotated protein. | Unannotated protein. | 0.691 |
DES48_106116 | DES48_10366 | GCA_900168775_00935 | GCA_900168775_03321 | Unannotated protein. | Unannotated protein. | 0.691 |
DES48_106116 | DES48_10617 | GCA_900168775_00935 | GCA_900168775_00836 | Unannotated protein. | Unannotated protein. | 0.954 |
DES48_106116 | DES48_10955 | GCA_900168775_00935 | GCA_900168775_03445 | Unannotated protein. | Unannotated protein. | 0.431 |
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