Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES48_101456 | DES48_101457 | GCA_900168775_01654 | GCA_900168775_01653 | Unannotated protein. | Unannotated protein. | 0.541 |
DES48_101456 | DES48_101459 | GCA_900168775_01654 | GCA_900168775_01651 | Unannotated protein. | Unannotated protein. | 0.439 |
DES48_101456 | hflX | GCA_900168775_01654 | GCA_900168775_01652 | Unannotated protein. | Unannotated protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.541 |
DES48_101457 | DES48_101456 | GCA_900168775_01653 | GCA_900168775_01654 | Unannotated protein. | Unannotated protein. | 0.541 |
DES48_101457 | DES48_101459 | GCA_900168775_01653 | GCA_900168775_01651 | Unannotated protein. | Unannotated protein. | 0.664 |
DES48_101457 | DES48_101478 | GCA_900168775_01653 | GCA_900168775_01633 | Unannotated protein. | Unannotated protein. | 0.654 |
DES48_101457 | DES48_11456 | GCA_900168775_01653 | GCA_900168775_02934 | Unannotated protein. | Unannotated protein. | 0.756 |
DES48_101457 | DES48_11815 | GCA_900168775_01653 | GCA_900168775_01435 | Unannotated protein. | Unannotated protein. | 0.666 |
DES48_101457 | ddl | GCA_900168775_01653 | GCA_900168775_03337 | Unannotated protein. | Unannotated protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.717 |
DES48_101457 | hflX | GCA_900168775_01653 | GCA_900168775_01652 | Unannotated protein. | Unannotated protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.857 |
DES48_101457 | miaA | GCA_900168775_01653 | GCA_900168775_01649 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.586 |
DES48_101457 | mrnC | GCA_900168775_01653 | GCA_900168775_03232 | Unannotated protein. | Unannotated protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.518 |
DES48_101457 | sepF | GCA_900168775_01653 | GCA_900168775_01493 | Unannotated protein. | Unannotated protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.650 |
DES48_101459 | DES48_101456 | GCA_900168775_01651 | GCA_900168775_01654 | Unannotated protein. | Unannotated protein. | 0.439 |
DES48_101459 | DES48_101457 | GCA_900168775_01651 | GCA_900168775_01653 | Unannotated protein. | Unannotated protein. | 0.664 |
DES48_101459 | hflX | GCA_900168775_01651 | GCA_900168775_01652 | Unannotated protein. | Unannotated protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.664 |
DES48_101459 | miaA | GCA_900168775_01651 | GCA_900168775_01649 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.434 |
DES48_101478 | DES48_101457 | GCA_900168775_01633 | GCA_900168775_01653 | Unannotated protein. | Unannotated protein. | 0.654 |
DES48_11456 | DES48_101457 | GCA_900168775_02934 | GCA_900168775_01653 | Unannotated protein. | Unannotated protein. | 0.756 |
DES48_11815 | DES48_101457 | GCA_900168775_01435 | GCA_900168775_01653 | Unannotated protein. | Unannotated protein. | 0.666 |
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