Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES48_101284 | DES48_101299 | GCA_900168775_01826 | GCA_900168775_01811 | Unannotated protein. | Unannotated protein. | 0.698 |
DES48_101284 | DES48_11450 | GCA_900168775_01826 | GCA_900168775_02928 | Unannotated protein. | Unannotated protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.587 |
DES48_101296 | DES48_101299 | GCA_900168775_01814 | GCA_900168775_01811 | Unannotated protein. | Unannotated protein. | 0.593 |
DES48_101296 | DES48_101301 | GCA_900168775_01814 | GCA_900168775_01809 | Unannotated protein. | Unannotated protein. | 0.497 |
DES48_101296 | DES48_10487 | GCA_900168775_01814 | GCA_900168775_02278 | Unannotated protein. | Unannotated protein. | 0.558 |
DES48_101296 | asnS | GCA_900168775_01814 | GCA_900168775_01812 | Unannotated protein. | Unannotated protein. | 0.705 |
DES48_101296 | nth | GCA_900168775_01814 | GCA_900168775_01810 | Unannotated protein. | Unannotated protein; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.504 |
DES48_101299 | DES48_101284 | GCA_900168775_01811 | GCA_900168775_01826 | Unannotated protein. | Unannotated protein. | 0.698 |
DES48_101299 | DES48_101296 | GCA_900168775_01811 | GCA_900168775_01814 | Unannotated protein. | Unannotated protein. | 0.593 |
DES48_101299 | DES48_101301 | GCA_900168775_01811 | GCA_900168775_01809 | Unannotated protein. | Unannotated protein. | 0.784 |
DES48_101299 | DES48_10143 | GCA_900168775_01811 | GCA_900168775_02426 | Unannotated protein. | Unannotated protein; Belongs to the UPF0473 family. | 0.627 |
DES48_101299 | DES48_10487 | GCA_900168775_01811 | GCA_900168775_02278 | Unannotated protein. | Unannotated protein. | 0.777 |
DES48_101299 | DES48_10488 | GCA_900168775_01811 | GCA_900168775_02279 | Unannotated protein. | Unannotated protein. | 0.781 |
DES48_101299 | DES48_11450 | GCA_900168775_01811 | GCA_900168775_02928 | Unannotated protein. | Unannotated protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.672 |
DES48_101299 | asnS | GCA_900168775_01811 | GCA_900168775_01812 | Unannotated protein. | Unannotated protein. | 0.636 |
DES48_101299 | nth | GCA_900168775_01811 | GCA_900168775_01810 | Unannotated protein. | Unannotated protein; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.927 |
DES48_101299 | rpoE | GCA_900168775_01811 | GCA_900168775_00557 | Unannotated protein. | Unannotated protein; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.661 |
DES48_101301 | DES48_101296 | GCA_900168775_01809 | GCA_900168775_01814 | Unannotated protein. | Unannotated protein. | 0.497 |
DES48_101301 | DES48_101299 | GCA_900168775_01809 | GCA_900168775_01811 | Unannotated protein. | Unannotated protein. | 0.784 |
DES48_101301 | asnS | GCA_900168775_01809 | GCA_900168775_01812 | Unannotated protein. | Unannotated protein. | 0.558 |
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