Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES48_101270 | DES48_101274 | GCA_900168775_01840 | GCA_900168775_01836 | Unannotated protein. | Unannotated protein; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | 0.815 |
DES48_101270 | DES48_101276 | GCA_900168775_01840 | GCA_900168775_01834 | Unannotated protein. | Unannotated protein. | 0.420 |
DES48_101270 | aroA | GCA_900168775_01840 | GCA_900168775_01833 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.493 |
DES48_101270 | aroB | GCA_900168775_01840 | GCA_900168775_01837 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.454 |
DES48_101270 | aroC | GCA_900168775_01840 | GCA_900168775_01838 | Unannotated protein. | Unannotated protein; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.465 |
DES48_101270 | cmk | GCA_900168775_01840 | GCA_900168775_01855 | Unannotated protein. | Unannotated protein. | 0.848 |
DES48_101270 | hisC | GCA_900168775_01840 | GCA_900168775_01835 | Unannotated protein. | Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.516 |
DES48_101274 | DES48_101270 | GCA_900168775_01836 | GCA_900168775_01840 | Unannotated protein; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Unannotated protein. | 0.815 |
DES48_101274 | DES48_101276 | GCA_900168775_01836 | GCA_900168775_01834 | Unannotated protein; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Unannotated protein. | 0.935 |
DES48_101274 | DES48_10428 | GCA_900168775_01836 | GCA_900168775_02219 | Unannotated protein; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Unannotated protein. | 0.891 |
DES48_101274 | DES48_10617 | GCA_900168775_01836 | GCA_900168775_00836 | Unannotated protein; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Unannotated protein. | 0.739 |
DES48_101274 | aroA | GCA_900168775_01836 | GCA_900168775_01833 | Unannotated protein; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.809 |
DES48_101274 | aroB | GCA_900168775_01836 | GCA_900168775_01837 | Unannotated protein; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Unannotated protein; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.899 |
DES48_101274 | aroC | GCA_900168775_01836 | GCA_900168775_01838 | Unannotated protein; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Unannotated protein; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.949 |
DES48_101274 | cmk | GCA_900168775_01836 | GCA_900168775_01855 | Unannotated protein; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Unannotated protein. | 0.702 |
DES48_101274 | hisC | GCA_900168775_01836 | GCA_900168775_01835 | Unannotated protein; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.883 |
DES48_101274 | pheA | GCA_900168775_01836 | GCA_900168775_02380 | Unannotated protein; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Unannotated protein. | 0.888 |
DES48_101276 | DES48_101270 | GCA_900168775_01834 | GCA_900168775_01840 | Unannotated protein. | Unannotated protein. | 0.420 |
DES48_101276 | DES48_101274 | GCA_900168775_01834 | GCA_900168775_01836 | Unannotated protein. | Unannotated protein; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | 0.935 |
DES48_101276 | DES48_10428 | GCA_900168775_01834 | GCA_900168775_02219 | Unannotated protein. | Unannotated protein. | 0.960 |
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