Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES48_101250 | DES48_101402 | GCA_900168775_01860 | GCA_900168775_01714 | Unannotated protein. | Unannotated protein. | 0.792 |
DES48_101250 | DES48_101455 | GCA_900168775_01860 | GCA_900168775_01655 | Unannotated protein. | Unannotated protein. | 0.635 |
DES48_101250 | DES48_10568 | GCA_900168775_01860 | GCA_900168775_01229 | Unannotated protein. | Unannotated protein. | 0.550 |
DES48_101250 | DES48_1163 | GCA_900168775_01860 | GCA_900168775_02383 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.547 |
DES48_101250 | GCA_900168775_02049 | GCA_900168775_01860 | GCA_900168775_02049 | Unannotated protein. | Unannotated protein. | 0.976 |
DES48_101250 | asnS | GCA_900168775_01860 | GCA_900168775_01812 | Unannotated protein. | Unannotated protein. | 0.598 |
DES48_101250 | gatB | GCA_900168775_01860 | GCA_900168775_02742 | Unannotated protein. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.563 |
DES48_101250 | glmS | GCA_900168775_01860 | GCA_900168775_03514 | Unannotated protein. | Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.642 |
DES48_101250 | gltX | GCA_900168775_01860 | GCA_900168775_03235 | Unannotated protein. | Unannotated protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.570 |
DES48_101250 | panD | GCA_900168775_01860 | GCA_900168775_01818 | Unannotated protein. | Unannotated protein; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.559 |
DES48_101402 | DES48_101250 | GCA_900168775_01714 | GCA_900168775_01860 | Unannotated protein. | Unannotated protein. | 0.792 |
DES48_101402 | DES48_101455 | GCA_900168775_01714 | GCA_900168775_01655 | Unannotated protein. | Unannotated protein. | 0.946 |
DES48_101402 | DES48_10568 | GCA_900168775_01714 | GCA_900168775_01229 | Unannotated protein. | Unannotated protein. | 0.804 |
DES48_101402 | GCA_900168775_02049 | GCA_900168775_01714 | GCA_900168775_02049 | Unannotated protein. | Unannotated protein. | 0.792 |
DES48_101402 | gatB | GCA_900168775_01714 | GCA_900168775_02742 | Unannotated protein. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.401 |
DES48_101402 | glmS | GCA_900168775_01714 | GCA_900168775_03514 | Unannotated protein. | Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.875 |
DES48_101402 | gltX | GCA_900168775_01714 | GCA_900168775_03235 | Unannotated protein. | Unannotated protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.850 |
DES48_101455 | DES48_101250 | GCA_900168775_01655 | GCA_900168775_01860 | Unannotated protein. | Unannotated protein. | 0.635 |
DES48_101455 | DES48_101402 | GCA_900168775_01655 | GCA_900168775_01714 | Unannotated protein. | Unannotated protein. | 0.946 |
DES48_101455 | GCA_900168775_02049 | GCA_900168775_01655 | GCA_900168775_02049 | Unannotated protein. | Unannotated protein. | 0.632 |
page 1 of 4