Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES48_101182 | DES48_1169 | GCA_900168775_02563 | GCA_900168775_02377 | Unannotated protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | Unannotated protein. | 0.716 |
DES48_101263 | DES48_108150 | GCA_900168775_01847 | GCA_900168775_02923 | Unannotated protein. | Unannotated protein. | 0.511 |
DES48_101263 | DES48_1169 | GCA_900168775_01847 | GCA_900168775_02377 | Unannotated protein. | Unannotated protein. | 0.578 |
DES48_101427 | DES48_1169 | GCA_900168775_01684 | GCA_900168775_02377 | Unannotated protein. | Unannotated protein. | 0.665 |
DES48_108150 | DES48_101263 | GCA_900168775_02923 | GCA_900168775_01847 | Unannotated protein. | Unannotated protein. | 0.511 |
DES48_108150 | DES48_109126 | GCA_900168775_02923 | GCA_900168775_03523 | Unannotated protein. | Unannotated protein. | 0.541 |
DES48_108150 | DES48_1169 | GCA_900168775_02923 | GCA_900168775_02377 | Unannotated protein. | Unannotated protein. | 0.639 |
DES48_109126 | DES48_108150 | GCA_900168775_03523 | GCA_900168775_02923 | Unannotated protein. | Unannotated protein. | 0.541 |
DES48_109126 | DES48_1169 | GCA_900168775_03523 | GCA_900168775_02377 | Unannotated protein. | Unannotated protein. | 0.655 |
DES48_11071 | DES48_1169 | GCA_900168775_01351 | GCA_900168775_02377 | Unannotated protein. | Unannotated protein. | 0.662 |
DES48_11269 | DES48_1169 | GCA_900168775_03222 | GCA_900168775_02377 | Unannotated protein. | Unannotated protein. | 0.652 |
DES48_11269 | nusG | GCA_900168775_03222 | GCA_900168775_03227 | Unannotated protein. | Unannotated protein; Participates in transcription elongation, termination and antitermination. | 0.553 |
DES48_11269 | obg | GCA_900168775_03222 | GCA_900168775_02378 | Unannotated protein. | Unannotated protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.640 |
DES48_1167 | DES48_1169 | GCA_900168775_02379 | GCA_900168775_02377 | Unannotated protein; Belongs to the UPF0735 family. | Unannotated protein. | 0.606 |
DES48_1167 | obg | GCA_900168775_02379 | GCA_900168775_02378 | Unannotated protein; Belongs to the UPF0735 family. | Unannotated protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.638 |
DES48_1169 | DES48_101182 | GCA_900168775_02377 | GCA_900168775_02563 | Unannotated protein. | Unannotated protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | 0.716 |
DES48_1169 | DES48_101263 | GCA_900168775_02377 | GCA_900168775_01847 | Unannotated protein. | Unannotated protein. | 0.578 |
DES48_1169 | DES48_101427 | GCA_900168775_02377 | GCA_900168775_01684 | Unannotated protein. | Unannotated protein. | 0.665 |
DES48_1169 | DES48_108150 | GCA_900168775_02377 | GCA_900168775_02923 | Unannotated protein. | Unannotated protein. | 0.639 |
DES48_1169 | DES48_109126 | GCA_900168775_02377 | GCA_900168775_03523 | Unannotated protein. | Unannotated protein. | 0.655 |
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