STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DES48_11144Unannotated protein; Belongs to the glycosyl hydrolase 1 family. (474 aa)    
Predicted Functional Partners:
DES48_10232
Unannotated protein.
 
 0.881
DES48_10227
Unannotated protein.
 
 0.879
DES48_102400
Unannotated protein.
 
 0.867
DES48_10262
Unannotated protein.
 
 0.865
DES48_11427
Unannotated protein.
  
 
 0.803
DES48_11143
Unannotated protein; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.728
GCA_900168775_00647
Unannotated protein.
    
  0.717
DES48_11142
Unannotated protein.
  
 
 0.710
DES48_11141
Unannotated protein.
  
 
 0.689
DES48_102144
Unannotated protein.
 
 0.664
Your Current Organism:
Paraliobacillus ryukyuensis
NCBI taxonomy Id: 200904
Other names: DSM 15140, IAM 15001, JCM 21472, NBRC 100001, NRIC 0520, P. ryukyuensis, Paraliobacillus ryukyuensis Ishikawa et al. 2003, strain O15-7
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