Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES48_101402 | DES48_10436 | GCA_900168775_01714 | GCA_900168775_02227 | Unannotated protein. | Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.461 |
DES48_101402 | DES48_108149 | GCA_900168775_01714 | GCA_900168775_02922 | Unannotated protein. | Unannotated protein; Belongs to the Fur family. | 0.860 |
DES48_101402 | rpoB | GCA_900168775_01714 | GCA_900168775_03221 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.430 |
DES48_101402 | rpoC | GCA_900168775_01714 | GCA_900168775_03220 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.469 |
DES48_101430 | DES48_108149 | GCA_900168775_01681 | GCA_900168775_02922 | Unannotated protein. | Unannotated protein; Belongs to the Fur family. | 0.653 |
DES48_10436 | DES48_101402 | GCA_900168775_02227 | GCA_900168775_01714 | Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Unannotated protein. | 0.461 |
DES48_10436 | DES48_108149 | GCA_900168775_02227 | GCA_900168775_02922 | Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Unannotated protein; Belongs to the Fur family. | 0.595 |
DES48_105175 | DES48_108149 | GCA_900168775_01128 | GCA_900168775_02922 | Unannotated protein. | Unannotated protein; Belongs to the Fur family. | 0.757 |
DES48_108147 | DES48_108149 | GCA_900168775_02920 | GCA_900168775_02922 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein; Belongs to the Fur family. | 0.652 |
DES48_108149 | DES48_101402 | GCA_900168775_02922 | GCA_900168775_01714 | Unannotated protein; Belongs to the Fur family. | Unannotated protein. | 0.860 |
DES48_108149 | DES48_101430 | GCA_900168775_02922 | GCA_900168775_01681 | Unannotated protein; Belongs to the Fur family. | Unannotated protein. | 0.653 |
DES48_108149 | DES48_10436 | GCA_900168775_02922 | GCA_900168775_02227 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.595 |
DES48_108149 | DES48_105175 | GCA_900168775_02922 | GCA_900168775_01128 | Unannotated protein; Belongs to the Fur family. | Unannotated protein. | 0.757 |
DES48_108149 | DES48_108147 | GCA_900168775_02922 | GCA_900168775_02920 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.652 |
DES48_108149 | def | GCA_900168775_02922 | GCA_900168775_01427 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.576 |
DES48_108149 | rpoA | GCA_900168775_02922 | GCA_900168775_03182 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.719 |
DES48_108149 | rpoB | GCA_900168775_02922 | GCA_900168775_03221 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.596 |
DES48_108149 | rpoC | GCA_900168775_02922 | GCA_900168775_03220 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.595 |
DES48_108149 | rpoZ | GCA_900168775_02922 | GCA_900168775_01517 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.581 |
def | DES48_108149 | GCA_900168775_01427 | GCA_900168775_02922 | Unannotated protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Unannotated protein; Belongs to the Fur family. | 0.576 |
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