Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES48_101358 | DES48_101359 | GCA_900168775_01754 | GCA_900168775_01753 | Unannotated protein; Belongs to the HMG-CoA reductase family. | Unannotated protein. | 0.995 |
DES48_101358 | DES48_101360 | GCA_900168775_01754 | GCA_900168775_01752 | Unannotated protein; Belongs to the HMG-CoA reductase family. | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.931 |
DES48_101358 | DES48_10963 | GCA_900168775_01754 | GCA_900168775_03454 | Unannotated protein; Belongs to the HMG-CoA reductase family. | Unannotated protein. | 0.871 |
DES48_101358 | DES48_10964 | GCA_900168775_01754 | GCA_900168775_03455 | Unannotated protein; Belongs to the HMG-CoA reductase family. | Unannotated protein. | 0.938 |
DES48_101358 | DES48_10965 | GCA_900168775_01754 | GCA_900168775_03456 | Unannotated protein; Belongs to the HMG-CoA reductase family. | Unannotated protein. | 0.993 |
DES48_101358 | fni | GCA_900168775_01754 | GCA_900168775_03423 | Unannotated protein; Belongs to the HMG-CoA reductase family. | Unannotated protein; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.897 |
DES48_101359 | DES48_101358 | GCA_900168775_01753 | GCA_900168775_01754 | Unannotated protein. | Unannotated protein; Belongs to the HMG-CoA reductase family. | 0.995 |
DES48_101359 | DES48_101360 | GCA_900168775_01753 | GCA_900168775_01752 | Unannotated protein. | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.996 |
DES48_101359 | DES48_10476 | GCA_900168775_01753 | GCA_900168775_02267 | Unannotated protein. | Unannotated protein; Belongs to the citrate synthase family. | 0.656 |
DES48_101359 | DES48_10963 | GCA_900168775_01753 | GCA_900168775_03454 | Unannotated protein. | Unannotated protein. | 0.916 |
DES48_101359 | DES48_10964 | GCA_900168775_01753 | GCA_900168775_03455 | Unannotated protein. | Unannotated protein. | 0.924 |
DES48_101359 | DES48_10965 | GCA_900168775_01753 | GCA_900168775_03456 | Unannotated protein. | Unannotated protein. | 0.916 |
DES48_101359 | GCA_900168775_02924 | GCA_900168775_01753 | GCA_900168775_02924 | Unannotated protein. | Unannotated protein. | 0.624 |
DES48_101359 | fni | GCA_900168775_01753 | GCA_900168775_03423 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.915 |
DES48_101360 | DES48_101358 | GCA_900168775_01752 | GCA_900168775_01754 | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | Unannotated protein; Belongs to the HMG-CoA reductase family. | 0.931 |
DES48_101360 | DES48_101359 | GCA_900168775_01752 | GCA_900168775_01753 | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | Unannotated protein. | 0.996 |
DES48_101360 | DES48_10476 | GCA_900168775_01752 | GCA_900168775_02267 | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | Unannotated protein; Belongs to the citrate synthase family. | 0.804 |
DES48_101360 | DES48_10963 | GCA_900168775_01752 | GCA_900168775_03454 | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | Unannotated protein. | 0.604 |
DES48_101360 | DES48_10964 | GCA_900168775_01752 | GCA_900168775_03455 | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | Unannotated protein. | 0.479 |
DES48_101360 | DES48_10965 | GCA_900168775_01752 | GCA_900168775_03456 | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | Unannotated protein. | 0.700 |
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