STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALS74548.1NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)    
Predicted Functional Partners:
ALS74546.1
Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
    0.858
ALS74547.1
RNase adaptor protein RapZ; Displays ATPase and GTPase activities.
  
  
 0.835
whiA
Sporulation regulator WhiA; Involved in cell division and chromosome segregation.
  
    0.780
ALS74433.1
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.700
ALS74285.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.650
ALS74544.1
Phosphocarrier protein Chr; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.590
ALS73880.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.542
ALS74550.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.519
ALS74549.1
Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.516
ALS74323.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.494
Your Current Organism:
Planococcus rifietoensis
NCBI taxonomy Id: 200991
Other names: ATCC BAA-790, DSM 15069, P. rifietoensis, Planococcus rifietensis, Planococcus rifietoensis corrig. Romano et al. 2003, Planococcus rifitiensis, strain M8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.