STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDV36_010747Uncharacterized protein. (454 aa)    
Predicted Functional Partners:
CDV36_005004
Uncharacterized protein.
    
 
 0.769
CDV36_013100
G-patch domain-containing protein.
    
   0.606
CDV36_007802
Pre-mRNA-splicing factor clf1.
    
 
 0.577
CDV36_012945
U2 small nuclear ribonucleoprotein A.
    
   0.565
CDV36_009389
Uncharacterized protein.
    
 
 0.542
CDV36_015728
C2H2-type domain-containing protein.
    
   0.529
CDV36_009404
G-patch domain-containing protein.
    
 
 0.446
CDV36_011571
Uncharacterized protein.
    
 
 0.420
Your Current Organism:
Fusarium kuroshium
NCBI taxonomy Id: 2010991
Other names: BPI:910340, CBS 142642, F. kuroshium, Fusarium kuroshium F. Na, J. D. Carrillo & A. Eskalen, 2018, Fusarium sp. JM-2017a, UCR:3641
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.