A0A1A9XTT9 protein (Glossina fuscipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1A9XTT9

Uncharacterized protein. (194 aa)

Predicted Functional Partners:

A0A1A9YG85

0.974

A0A1A9XB17

0.973

A0A1A9Y4M2

0.962

A0A1A9XH53

0.953

A0A1A9XD28

0.952

A0A1A9YE54

0.951

A0A1A9X9N8

0.948

A0A1A9XTF4

0.948

A0A1A9Y9U9

0.947

A0A1A9Y7B2

0.946

Your Current Organism:

Glossina fuscipes

NCBI taxonomy Id: 201502
Other names: G. fuscipes fuscipes, Glossina fuscipes fuscipes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1A9X9N8	A0A1A9XB17	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	MRP-L46 domain-containing protein.	0.997
A0A1A9X9N8	A0A1A9XD28	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	39S mitochondrial ribosomal protein L17.	0.998
A0A1A9X9N8	A0A1A9XH53	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	39S mitochondrial ribosomal protein L49.	0.986
A0A1A9X9N8	A0A1A9XTF4	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	39S ribosomal protein L32, mitochondrial.	0.996
A0A1A9X9N8	A0A1A9XTT9	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein.	0.948
A0A1A9X9N8	A0A1A9Y4M2	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein.	0.998
A0A1A9X9N8	A0A1A9Y7B2	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	39S ribosomal protein L23, mitochondrial.	0.992
A0A1A9X9N8	A0A1A9Y9U9	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.	0.999
A0A1A9X9N8	A0A1A9YE54	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein.	0.999
A0A1A9X9N8	A0A1A9YG85	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein.	0.999
A0A1A9XB17	A0A1A9X9N8	MRP-L46 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	0.997
A0A1A9XB17	A0A1A9XD28	MRP-L46 domain-containing protein.	39S mitochondrial ribosomal protein L17.	0.994
A0A1A9XB17	A0A1A9XH53	MRP-L46 domain-containing protein.	39S mitochondrial ribosomal protein L49.	0.985
A0A1A9XB17	A0A1A9XTF4	MRP-L46 domain-containing protein.	39S ribosomal protein L32, mitochondrial.	0.989
A0A1A9XB17	A0A1A9XTT9	MRP-L46 domain-containing protein.	Uncharacterized protein.	0.973
A0A1A9XB17	A0A1A9Y4M2	MRP-L46 domain-containing protein.	Uncharacterized protein.	0.989
A0A1A9XB17	A0A1A9Y7B2	MRP-L46 domain-containing protein.	39S ribosomal protein L23, mitochondrial.	0.995
A0A1A9XB17	A0A1A9Y9U9	MRP-L46 domain-containing protein.	39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.	0.980
A0A1A9XB17	A0A1A9YE54	MRP-L46 domain-containing protein.	Uncharacterized protein.	0.994
A0A1A9XB17	A0A1A9YG85	MRP-L46 domain-containing protein.	Uncharacterized protein.	0.993