STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1A9YBB7Uncharacterized protein. (389 aa)    
Predicted Functional Partners:
A0A1A9YHW4
Small nuclear ribonucleoprotein Sm D2.
    
 0.964
A0A1A9XH55
PID domain-containing protein.
    
  0.962
A0A1A9XLV0
Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
  0.962
A0A1A9XTY0
Sm domain-containing protein.
    
 0.850
A0A1A9YSL4
Small nuclear ribonucleoprotein Sm D3.
    
 0.728
A0A1A9XK33
Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.
    
 0.695
A0A1A9XWM2
Uncharacterized protein.
   
 0.692
A0A1A9YSF9
Uncharacterized protein.
   
 0.678
A0A1A9XU66
GRIP domain-containing protein.
    
 0.677
A0A1A9XZA3
U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.
    
 
 0.657
Your Current Organism:
Glossina fuscipes
NCBI taxonomy Id: 201502
Other names: G. fuscipes fuscipes, Glossina fuscipes fuscipes
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.