A0A1A9YSR5 protein (Glossina fuscipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1A9YSR5

tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (528 aa)

Predicted Functional Partners:

A0A1A9X6C0

0.967

A0A1A9XK78

0.966

A0A1A9XXU0

0.966

A0A1A9YGL5

0.966

A0A1A9Y1W2

0.964

A0A1A9YL61

0.962

A0A1A9XGI2

0.960

A0A1A9YFI9

0.960

A0A1A9Y566

0.959

A0A1A9YLQ6

0.956

Your Current Organism:

Glossina fuscipes

NCBI taxonomy Id: 201502
Other names: G. fuscipes fuscipes, Glossina fuscipes fuscipes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1A9X6C0	A0A1A9XK78	tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.403
A0A1A9X6C0	A0A1A9YL61	tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	60S ribosomal protein L5.	0.805
A0A1A9X6C0	A0A1A9YLQ6	tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.514
A0A1A9X6C0	A0A1A9YSR5	tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.967
A0A1A9XGI2	A0A1A9XK78	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.999
A0A1A9XGI2	A0A1A9XXU0	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal_L7Ae domain-containing protein.	0.999
A0A1A9XGI2	A0A1A9Y1W2	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.999
A0A1A9XGI2	A0A1A9Y566	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	TRASH domain-containing protein.	0.999
A0A1A9XGI2	A0A1A9YFI9	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Uncharacterized protein.	0.999
A0A1A9XGI2	A0A1A9YGL5	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
A0A1A9XGI2	A0A1A9YL61	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	60S ribosomal protein L5.	0.999
A0A1A9XGI2	A0A1A9YLQ6	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.999
A0A1A9XGI2	A0A1A9YSR5	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.960
A0A1A9XK78	A0A1A9X6C0	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.403
A0A1A9XK78	A0A1A9XGI2	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
A0A1A9XK78	A0A1A9XXU0	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Ribosomal_L7Ae domain-containing protein.	0.999
A0A1A9XK78	A0A1A9Y1W2	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.999
A0A1A9XK78	A0A1A9Y566	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	TRASH domain-containing protein.	0.999
A0A1A9XK78	A0A1A9YFI9	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Uncharacterized protein.	0.999
A0A1A9XK78	A0A1A9YGL5	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999