STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMN91_008822E3 ubiquitin-protein ligase TRIM33. (1067 aa)    
Predicted Functional Partners:
X777_10145
Mothers against decapentaplegic homolog.
   
 0.820
DMN91_001296
annotation not available
   
 
 0.796
X777_15450
Anaphase-promoting complex subunit.
   
   0.763
X777_12247
Anaphase-promoting complex subunit.
    
   0.763
X777_07379
Anaphase-promoting complex subunit.
   
   0.763
DMN91_005011
Cell division cycle protein 16-like protein.
    
   0.763
X777_15104
Anaphase-promoting complex subunit.
    
   0.763
DMN91_008166
Cell division cycle protein 27-like protein.
   
   0.763
DMN91_009557
Ubiquitin-40S ribosomal protein S27a.
    
 0.666
DMN91_008061
Cyclin-A1; Belongs to the cyclin family.
   
   0.569
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.