STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMN91_004995Ubiquitin-like protein. (73 aa)    
Predicted Functional Partners:
X777_06515
U4/U6.U5 tri-snRNP-associated protein.
    
 0.996
DMN91_010499
Pre-mRNA-processing-splicing factor.
    
 
 0.993
X777_06907
Pre-mRNA-splicing factor 38A.
    
 0.964
DMN91_001093
Microfibrillar-associated protein.
    
 0.881
X777_08388
Microfibrillar-associated protein.
    
 0.881
X777_16932
NEDD8.
   
  
 0.874
X777_13871
WW domain-binding protein.
    
  0.857
X777_08387
Pre-mRNA-processing factor.
    
 0.848
DMN91_000861
RNA-binding motif protein, X-linked.
   
   0.843
DMN91_000687
Coiled-coil domain-containing protein.
   
    0.843
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.