STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMN91_002036VIP36-like protein. (322 aa)    
Predicted Functional Partners:
X777_03078
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.831
X777_12179
Transmembrane emp24 domain-containing protein; Belongs to the EMP24/GP25L family.
   
 0.734
X777_01879
Transmembrane emp24 domain-containing protein bai.
   
 0.734
DMN91_003898
BET1-like protein.
   
 
 0.730
DMN91_005044
Golgi SNAP receptor complex member; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 
 0.711
DMN91_005620
Vesicle-trafficking protein SEC22b-B; Belongs to the synaptobrevin family.
    
 0.701
X777_08507
Golgin subfamily A member.
     
 0.700
X777_03295
Protein ERGIC-53.
    
0.697
DMN91_001233
Syntaxin-5; Belongs to the syntaxin family.
     
 0.691
X777_10606
Protein transport protein Sec24B.
    
 0.684
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.