DMN91_008799 protein (Ooceraea biroi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DMN91_008799

Death domain-containing adapter protein BG4. (267 aa)

Predicted Functional Partners:

DMN91_010904

0.900

X777_05906

0.877

X777_08963

0.603

X777_08918

0.587

X777_00986

0.547

X777_03564

0.527

X777_10764

0.468

X777_11853

0.445

DMN91_007153

0.425

DMN91_004291

0.406

Your Current Organism:

Ooceraea biroi

NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMN91_004291	DMN91_008799	A0A026X1W8	A0A026WCL2	Cyclin-G-associated kinase.	Death domain-containing adapter protein BG4.	0.406
DMN91_004291	DMN91_010904	A0A026X1W8	A0A026WTN7	Cyclin-G-associated kinase.	Receptor-interacting serine/threonine-protein kinase.	0.406
DMN91_004291	X777_11853	A0A026X1W8	A0A026W016	Cyclin-G-associated kinase.	Mitogen-activated protein kinase kinase kinase.	0.603
DMN91_007153	DMN91_008799	A0A026WXW8	A0A026WCL2	Regulator of G-protein signaling.	Death domain-containing adapter protein BG4.	0.425
DMN91_007153	DMN91_010904	A0A026WXW8	A0A026WTN7	Regulator of G-protein signaling.	Receptor-interacting serine/threonine-protein kinase.	0.425
DMN91_007153	X777_00986	A0A026WXW8	A0A026WS07	Regulator of G-protein signaling.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.563
DMN91_007153	X777_11853	A0A026WXW8	A0A026W016	Regulator of G-protein signaling.	Mitogen-activated protein kinase kinase kinase.	0.567
DMN91_008799	DMN91_004291	A0A026WCL2	A0A026X1W8	Death domain-containing adapter protein BG4.	Cyclin-G-associated kinase.	0.406
DMN91_008799	DMN91_007153	A0A026WCL2	A0A026WXW8	Death domain-containing adapter protein BG4.	Regulator of G-protein signaling.	0.425
DMN91_008799	DMN91_010904	A0A026WCL2	A0A026WTN7	Death domain-containing adapter protein BG4.	Receptor-interacting serine/threonine-protein kinase.	0.900
DMN91_008799	X777_00986	A0A026WCL2	A0A026WS07	Death domain-containing adapter protein BG4.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.547
DMN91_008799	X777_03564	A0A026WCL2	A0A026VSJ2	Death domain-containing adapter protein BG4.	Uncharacterized protein.	0.527
DMN91_008799	X777_05906	A0A026WCL2	A0A026WDB3	Death domain-containing adapter protein BG4.	Caspase-10; Belongs to the peptidase C14A family.	0.877
DMN91_008799	X777_08918	A0A026WCL2	A0A026W8F5	Death domain-containing adapter protein BG4.	Apoptosis 2 inhibitor.	0.587
DMN91_008799	X777_08963	A0A026WCL2	A0A026W8J6	Death domain-containing adapter protein BG4.	Uncharacterized protein.	0.603
DMN91_008799	X777_10764	A0A026WCL2	A0A026W6R0	Death domain-containing adapter protein BG4.	TGF-beta-activated kinase 1 and MAP3K7-binding protein.	0.468
DMN91_008799	X777_11853	A0A026WCL2	A0A026W016	Death domain-containing adapter protein BG4.	Mitogen-activated protein kinase kinase kinase.	0.445
DMN91_010904	DMN91_004291	A0A026WTN7	A0A026X1W8	Receptor-interacting serine/threonine-protein kinase.	Cyclin-G-associated kinase.	0.406
DMN91_010904	DMN91_007153	A0A026WTN7	A0A026WXW8	Receptor-interacting serine/threonine-protein kinase.	Regulator of G-protein signaling.	0.425
DMN91_010904	DMN91_008799	A0A026WTN7	A0A026WCL2	Receptor-interacting serine/threonine-protein kinase.	Death domain-containing adapter protein BG4.	0.900