STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X777_05775Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (162 aa)    
Predicted Functional Partners:
DMN91_008597
Vesicle transport protein GOT1B.
   
 
 0.580
DMN91_001233
Syntaxin-5; Belongs to the syntaxin family.
    
 
 0.567
X777_03124
CTD nuclear envelope phosphatase 1-like protein.
      
 0.517
DMN91_011450
F-box only protein.
      
 0.503
DMN91_003898
BET1-like protein.
    
 
 0.424
DMN91_005771
Synaptobrevin-like protein YKT6; Belongs to the synaptobrevin family.
    
 
 0.418
X777_08975
Prolyl 4-hydroxylase subunit alpha-2.
      
 0.414
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.