STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X777_06581Tap-RNA_bind domain-containing protein. (219 aa)    
Predicted Functional Partners:
X777_11571
NTF2-related export protein.
    
 0.885
X777_14743
E3 SUMO-protein ligase RanBP2.
    
 0.860
DMN91_011318
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]
   
 0.852
DMN91_002662
RNA and export factor-binding protein.
    
 0.850
DMN91_012022
mRNA export factor.
    
 0.799
X777_06008
Nuclear pore glycoprotein p62.
    
 0.789
X777_03776
Nuclear pore complex protein.
    
 0.770
DMN91_010334
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.754
X777_04476
Protein xmas-2.
    
 
 0.734
X777_14695
Polymerase delta-interacting protein.
    
 0.724
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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