STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X777_07151RNA-binding protein squid. (328 aa)    
Predicted Functional Partners:
X777_07357
RNA-binding protein squid.
  
  
 
0.904
X777_04971
RNA-binding protein squid.
  
  
 
0.901
X777_04824
Heterogeneous nuclear ribonucleoprotein 27C.
  
 
0.759
X777_01905
Protein spitz.
    
 
 0.608
X777_01297
Zinc finger CCCH domain-containing protein.
    
 
 0.602
X777_11814
Cleavage stimulation factor subunit.
  
 
 0.594
X777_07784
Serine/arginine-rich splicing factor.
  
 
 0.534
X777_12173
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
  
 0.519
X777_11606
CUGBP Elav-like family member.
  
 
 
 0.517
X777_13039
Serine/arginine-rich splicing factor.
  
 0.465
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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