STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X777_05867Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family. (608 aa)    
Predicted Functional Partners:
X777_14087
Vacuolar protein sorting-associated protein 16-like protein.
   
 0.999
X777_11869
Vam6/Vps39-like protein.
   
 0.988
X777_04943
Vacuolar protein sorting-associated protein 18-like protein.
   
 0.977
X777_05241
Vacuolar protein sorting-associated protein 11 homolog; Belongs to the VPS11 family.
   
 0.969
X777_09347
Vacuolar protein sorting-associated protein 41-like protein.
    
 0.941
DMN91_005672
Vacuolar protein sorting-associated protein 8-like protein.
    
 
 0.920
X777_12188
Ras-related protein Rab-9B.
    
 
 0.913
DMN91_006557
Vacuolar fusion protein CCZ1-like protein.
    
 
 0.908
DMN91_000033
Syntaxin-12; Belongs to the syntaxin family.
    
 
 0.907
DMN91_006122
VPS33B-interacting protein.
   
 
 0.900
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.