STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X777_05972U11/U12 small nuclear ribonucleoprotein 48 kDa protein. (122 aa)    
Predicted Functional Partners:
X777_08387
Pre-mRNA-processing factor.
   
 0.903
DMN91_000720
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
    
 0.880
DMN91_005468
Cell division cycle 5-like protein.
   
 
 0.851
DMN91_000917
Pre-mRNA-splicing factor syf2.
    
 0.851
DMN91_010321
U5 small nuclear ribonucleoprotein component.
    
 
 0.840
DMN91_010499
Pre-mRNA-processing-splicing factor.
   
 
 0.836
X777_00138
Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.829
DMN91_007031
Uncharacterized protein.
   
 
 0.826
DMN91_004171
BUD31-like protein.
    
 
 0.818
DMN91_003280
Uncharacterized protein.
    
 0.812
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.