STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X777_04997Uncharacterized protein. (121 aa)    
Predicted Functional Partners:
DMN91_002047
Transcription elongation factor SPT5.
   
 0.667
DMN91_000771
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.653
X777_02459
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
 0.653
DMN91_008090
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 0.653
DMN91_010284
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
 0.653
DMN91_004582
DNA-directed RNA polymerase II subunit RPB3.
    
 0.653
X777_09882
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
    
 0.652
DMN91_004666
DNA-directed RNA polymerase II subunit RPB11.
    
 0.651
DMN91_002368
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
    
 0.637
X777_03109
Transcription initiation factor IIB.
    
 0.636
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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