X777_02985 protein (Ooceraea biroi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

X777_02985

Protein Dok-7. (1128 aa)

Predicted Functional Partners:

DMN91_007701

0.954

X777_01610

0.713

X777_00998

0.600

X777_03147

0.591

X777_09052

0.567

X777_10584

0.433

X777_06273

0.407

DMN91_012574

0.406

Your Current Organism:

Ooceraea biroi

NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMN91_007701	X777_01610	A0A026WF73	A0A026WPI6	Tyrosine-protein kinase transmembrane receptor Ror2; Belongs to the protein kinase superfamily. Tyr protein kinase family.	43 kDa receptor-associated protein of the synapse.	0.720
DMN91_007701	X777_02985	A0A026WF73	A0A026WL18	Tyrosine-protein kinase transmembrane receptor Ror2; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Protein Dok-7.	0.954
DMN91_012574	X777_02985	A0A026VVY8	A0A026WL18	Ras-related GTP-binding protein D.	Protein Dok-7.	0.406
DMN91_012574	X777_10584	A0A026VVY8	A0A026W5R8	Ras-related GTP-binding protein D.	Ras-related GTP-binding protein A.	0.999
X777_00998	X777_02985	A0A026WQC6	A0A026WL18	Uncharacterized protein.	Protein Dok-7.	0.600
X777_00998	X777_03147	A0A026WQC6	A0A026WLX0	Uncharacterized protein.	Coiled-coil domain-containing protein.	0.990
X777_00998	X777_09052	A0A026WQC6	A0A026W8R8	Uncharacterized protein.	Calcium uptake protein 1-like protein, mitochondrial.	0.991
X777_01610	DMN91_007701	A0A026WPI6	A0A026WF73	43 kDa receptor-associated protein of the synapse.	Tyrosine-protein kinase transmembrane receptor Ror2; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.720
X777_01610	X777_02985	A0A026WPI6	A0A026WL18	43 kDa receptor-associated protein of the synapse.	Protein Dok-7.	0.713
X777_02985	DMN91_007701	A0A026WL18	A0A026WF73	Protein Dok-7.	Tyrosine-protein kinase transmembrane receptor Ror2; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.954
X777_02985	DMN91_012574	A0A026WL18	A0A026VVY8	Protein Dok-7.	Ras-related GTP-binding protein D.	0.406
X777_02985	X777_00998	A0A026WL18	A0A026WQC6	Protein Dok-7.	Uncharacterized protein.	0.600
X777_02985	X777_01610	A0A026WL18	A0A026WPI6	Protein Dok-7.	43 kDa receptor-associated protein of the synapse.	0.713
X777_02985	X777_03147	A0A026WL18	A0A026WLX0	Protein Dok-7.	Coiled-coil domain-containing protein.	0.591
X777_02985	X777_06273	A0A026WL18	A0A026WDU2	Protein Dok-7.	Protein bric-a-brac.	0.407
X777_02985	X777_09052	A0A026WL18	A0A026W8R8	Protein Dok-7.	Calcium uptake protein 1-like protein, mitochondrial.	0.567
X777_02985	X777_10584	A0A026WL18	A0A026W5R8	Protein Dok-7.	Ras-related GTP-binding protein A.	0.433
X777_03147	X777_00998	A0A026WLX0	A0A026WQC6	Coiled-coil domain-containing protein.	Uncharacterized protein.	0.990
X777_03147	X777_02985	A0A026WLX0	A0A026WL18	Coiled-coil domain-containing protein.	Protein Dok-7.	0.591
X777_03147	X777_09052	A0A026WLX0	A0A026W8R8	Coiled-coil domain-containing protein.	Calcium uptake protein 1-like protein, mitochondrial.	0.990