STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE76494.1Lysophospholipase L1. (254 aa)    
Predicted Functional Partners:
SHE46947.1
Phosphatidylinositol alpha 1,6-mannosyltransferase.
 
      0.899
SHE64874.1
D-serine deaminase, pyridoxal phosphate-dependent.
  
     0.638
SHF67447.1
DNA polymerase-1.
  
     0.622
SHF36272.1
Glycosyl hydrolases family 6; Belongs to the glycosyl hydrolase family 6.
  
 0.591
SHE76464.1
ADP-ribosylglycohydrolase.
       0.496
SHF39352.1
Protein of unknown function.
  
     0.484
SHF82536.1
Transcriptional regulator, ArsR family.
  
     0.452
SHE64837.1
L-gulonolactone oxidase.
  
     0.427
SHE76516.1
BadF-type ATPase.
       0.424
SHE76549.1
6-phospho-beta-glucosidase.
       0.424
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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