Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE47044.1 | SHE49461.1 | SAMN05444320_101175 | SAMN05444320_101235 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | L-proline dehydrogenase. | 0.759 |
SHE47044.1 | SHF12546.1 | SAMN05444320_101175 | SAMN05444320_102586 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.521 |
SHE47044.1 | SHF31476.1 | SAMN05444320_101175 | SAMN05444320_103189 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Glutamate synthase (NADPH/NADH) large chain. | 0.534 |
SHE47044.1 | SHF85181.1 | SAMN05444320_101175 | SAMN05444320_105228 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Ferredoxin-NADP reductase. | 0.780 |
SHE47044.1 | SHG21788.1 | SAMN05444320_101175 | SAMN05444320_10745 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Ferredoxin-NADP reductase. | 0.794 |
SHE47044.1 | SHG45854.1 | SAMN05444320_101175 | SAMN05444320_10988 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.521 |
SHE47044.1 | SHH04513.1 | SAMN05444320_101175 | SAMN05444320_11952 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | 0.521 |
SHE49429.1 | SHE49461.1 | SAMN05444320_101234 | SAMN05444320_101235 | Acyl-CoA thioesterase. | L-proline dehydrogenase. | 0.783 |
SHE49429.1 | proC | SAMN05444320_101234 | SAMN05444320_101233 | Acyl-CoA thioesterase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.685 |
SHE49461.1 | SHE47044.1 | SAMN05444320_101235 | SAMN05444320_101175 | L-proline dehydrogenase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.759 |
SHE49461.1 | SHE49429.1 | SAMN05444320_101235 | SAMN05444320_101234 | L-proline dehydrogenase. | Acyl-CoA thioesterase. | 0.783 |
SHE49461.1 | SHF12546.1 | SAMN05444320_101235 | SAMN05444320_102586 | L-proline dehydrogenase. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.876 |
SHE49461.1 | SHF31476.1 | SAMN05444320_101235 | SAMN05444320_103189 | L-proline dehydrogenase. | Glutamate synthase (NADPH/NADH) large chain. | 0.897 |
SHE49461.1 | SHF63183.1 | SAMN05444320_101235 | SAMN05444320_104339 | L-proline dehydrogenase. | Pyrroline-5-carboxylate reductase. | 0.847 |
SHE49461.1 | SHF85181.1 | SAMN05444320_101235 | SAMN05444320_105228 | L-proline dehydrogenase. | Ferredoxin-NADP reductase. | 0.759 |
SHE49461.1 | SHG21788.1 | SAMN05444320_101235 | SAMN05444320_10745 | L-proline dehydrogenase. | Ferredoxin-NADP reductase. | 0.759 |
SHE49461.1 | SHG45854.1 | SAMN05444320_101235 | SAMN05444320_10988 | L-proline dehydrogenase. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.957 |
SHE49461.1 | SHH04513.1 | SAMN05444320_101235 | SAMN05444320_11952 | L-proline dehydrogenase. | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | 0.801 |
SHE49461.1 | proC | SAMN05444320_101235 | SAMN05444320_101233 | L-proline dehydrogenase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.942 |
SHF12546.1 | SHE47044.1 | SAMN05444320_102586 | SAMN05444320_101175 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.521 |
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