STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE49986.1Protein of unknown function. (187 aa)    
Predicted Functional Partners:
SHE50088.1
Hypothetical protein.
       0.802
SHG57371.1
Hypothetical protein.
  
     0.733
SHE47369.1
Hypothetical protein.
  
     0.707
SHE42020.1
Dienelactone hydrolase.
  
     0.706
SHE67748.1
Septum formation.
  
     0.687
SHG36641.1
TIGR02569 family protein.
  
     0.650
SHG36186.1
PQQ-like domain-containing protein.
  
    0.647
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
       0.640
SHE55259.1
Hypothetical protein.
  
     0.631
SHG49830.1
Hypothetical protein.
  
     0.625
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.