STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE51411.1Nicotinamidase-related amidase. (186 aa)    
Predicted Functional Partners:
SHF27647.1
Pyridoxal-dependent decarboxylase conserved domain-containing protein.
  
    0.775
SHE51385.1
NTP pyrophosphatase, house-cleaning of non-canonical NTPs.
       0.678
SHF59787.1
Ribosomal protein S12 methylthiotransferase accessory factor.
  
     0.651
SHF57570.1
ABC-2 type transport system permease protein.
  
     0.598
SHE51346.1
Hippurate hydrolase.
       0.569
SHG69553.1
Amino acid adenylation domain-containing protein.
  
 
 0.515
SHG60675.1
Aryl carrier domain-containing protein.
     
 0.509
SHG70392.1
Isochorismatase family protein.
     
 0.509
SHH12219.1
Aryl carrier domain-containing protein.
     
 0.509
SHH12248.1
Isochorismatase family protein.
     
 0.509
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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