STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE60857.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (230 aa)    
Predicted Functional Partners:
SHE60903.1
Hypothetical protein.
       0.752
SHF02865.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
    
  0.734
SHF07962.1
PfaB family protein.
  
 
  0.711
SHF59178.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.625
SHG69585.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
 
 0.622
SHG69553.1
Amino acid adenylation domain-containing protein.
  
 
 0.603
SHF84175.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
    0.582
SHE60938.1
Sugar phosphate permease.
       0.552
SHE60989.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
   
   0.544
SHF38301.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
    0.527
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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