Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE42504.1 | SHE42797.1 | SAMN05444320_10151 | SAMN05444320_10158 | Chaperone protein HscA; Belongs to the heat shock protein 70 family. | Type VII secretion protein EccE. | 0.763 |
SHE42504.1 | SHE42842.1 | SAMN05444320_10151 | SAMN05444320_10159 | Chaperone protein HscA; Belongs to the heat shock protein 70 family. | Hypothetical protein. | 0.765 |
SHE42504.1 | SHE53060.1 | SAMN05444320_10151 | SAMN05444320_101338 | Chaperone protein HscA; Belongs to the heat shock protein 70 family. | Hypothetical protein. | 0.666 |
SHE42504.1 | SHE65070.1 | SAMN05444320_10151 | SAMN05444320_101674 | Chaperone protein HscA; Belongs to the heat shock protein 70 family. | Transcriptional regulator, contains XRE-family HTH domain. | 0.760 |
SHE42504.1 | SHF14382.1 | SAMN05444320_10151 | SAMN05444320_102644 | Chaperone protein HscA; Belongs to the heat shock protein 70 family. | GDSL-like Lipase/Acylhydrolase family protein. | 0.719 |
SHE42504.1 | SHG05325.1 | SAMN05444320_10151 | SAMN05444320_106196 | Chaperone protein HscA; Belongs to the heat shock protein 70 family. | Hypothetical protein. | 0.654 |
SHE42504.1 | SHG08551.1 | SAMN05444320_10151 | SAMN05444320_106312 | Chaperone protein HscA; Belongs to the heat shock protein 70 family. | Hypothetical protein. | 0.590 |
SHE42504.1 | SHG12964.1 | SAMN05444320_10151 | SAMN05444320_106475 | Chaperone protein HscA; Belongs to the heat shock protein 70 family. | Protein of unknown function. | 0.710 |
SHE42504.1 | SHG14629.1 | SAMN05444320_10151 | SAMN05444320_106538 | Chaperone protein HscA; Belongs to the heat shock protein 70 family. | RES domain-containing protein. | 0.719 |
SHE42797.1 | SHE42504.1 | SAMN05444320_10158 | SAMN05444320_10151 | Type VII secretion protein EccE. | Chaperone protein HscA; Belongs to the heat shock protein 70 family. | 0.763 |
SHE42797.1 | SHE42842.1 | SAMN05444320_10158 | SAMN05444320_10159 | Type VII secretion protein EccE. | Hypothetical protein. | 0.960 |
SHE42797.1 | SHE53060.1 | SAMN05444320_10158 | SAMN05444320_101338 | Type VII secretion protein EccE. | Hypothetical protein. | 0.768 |
SHE42797.1 | SHE65070.1 | SAMN05444320_10158 | SAMN05444320_101674 | Type VII secretion protein EccE. | Transcriptional regulator, contains XRE-family HTH domain. | 0.775 |
SHE42797.1 | SHF14382.1 | SAMN05444320_10158 | SAMN05444320_102644 | Type VII secretion protein EccE. | GDSL-like Lipase/Acylhydrolase family protein. | 0.767 |
SHE42797.1 | SHG05325.1 | SAMN05444320_10158 | SAMN05444320_106196 | Type VII secretion protein EccE. | Hypothetical protein. | 0.748 |
SHE42797.1 | SHG08551.1 | SAMN05444320_10158 | SAMN05444320_106312 | Type VII secretion protein EccE. | Hypothetical protein. | 0.751 |
SHE42797.1 | SHG12964.1 | SAMN05444320_10158 | SAMN05444320_106475 | Type VII secretion protein EccE. | Protein of unknown function. | 0.768 |
SHE42797.1 | SHG14629.1 | SAMN05444320_10158 | SAMN05444320_106538 | Type VII secretion protein EccE. | RES domain-containing protein. | 0.755 |
SHE42842.1 | SHE42504.1 | SAMN05444320_10159 | SAMN05444320_10151 | Hypothetical protein. | Chaperone protein HscA; Belongs to the heat shock protein 70 family. | 0.765 |
SHE42842.1 | SHE42797.1 | SAMN05444320_10159 | SAMN05444320_10158 | Hypothetical protein. | Type VII secretion protein EccE. | 0.960 |
page 1 of 5