STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE73059.1Pilus assembly protein CpaF. (395 aa)    
Predicted Functional Partners:
SHE73095.1
Tight adherence protein B.
 
  
 0.965
SHE73132.1
Type II secretion system (T2SS), protein F.
  
  
 0.959
SHE73022.1
Helicase/secretion neighborhood CpaE-like protein.
     0.889
SHE73168.1
Protein of unknown function.
     
 0.843
SHE73199.1
Helicase/secretion neighborhood TadE-like protein.
     
 0.732
SHG73678.1
Hypothetical protein.
    
 0.645
SHG57563.1
Flp pilus assembly protein CpaB.
  
  
 0.622
SHE48217.1
MinD-like ATPase involved in chromosome partitioning or flagellar assembly.
 
  
 0.427
SHG80024.1
Cytosine permease.
      
 0.422
SHG64188.1
Potassium/proton antiporter membrane subunit, CPA2 family.
      
 0.416
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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