Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHE96867.1 | SHE96909.1 | SAMN05444320_102120 | SAMN05444320_102121 | Two component transcriptional regulator, LuxR family. | Excalibur calcium-binding domain-containing protein. | 0.572 |
| SHE96909.1 | SHE96867.1 | SAMN05444320_102121 | SAMN05444320_102120 | Excalibur calcium-binding domain-containing protein. | Two component transcriptional regulator, LuxR family. | 0.572 |
| SHE96909.1 | SHF82701.1 | SAMN05444320_102121 | SAMN05444320_105136 | Excalibur calcium-binding domain-containing protein. | WD40-like Beta Propeller Repeat. | 0.677 |
| SHE96909.1 | SHG95202.1 | SAMN05444320_102121 | SAMN05444320_11725 | Excalibur calcium-binding domain-containing protein. | Hypothetical protein. | 0.430 |
| SHE96909.1 | guaA | SAMN05444320_102121 | SAMN05444320_1019 | Excalibur calcium-binding domain-containing protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.652 |
| SHE96909.1 | rbfA | SAMN05444320_102121 | SAMN05444320_103328 | Excalibur calcium-binding domain-containing protein. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.409 |
| SHE96909.1 | secY | SAMN05444320_102121 | SAMN05444320_10174 | Excalibur calcium-binding domain-containing protein. | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.408 |
| SHF82701.1 | SHE96909.1 | SAMN05444320_105136 | SAMN05444320_102121 | WD40-like Beta Propeller Repeat. | Excalibur calcium-binding domain-containing protein. | 0.677 |
| SHG95202.1 | SHE96909.1 | SAMN05444320_11725 | SAMN05444320_102121 | Hypothetical protein. | Excalibur calcium-binding domain-containing protein. | 0.430 |
| guaA | SHE96909.1 | SAMN05444320_1019 | SAMN05444320_102121 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Excalibur calcium-binding domain-containing protein. | 0.652 |
| guaA | secY | SAMN05444320_1019 | SAMN05444320_10174 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.479 |
| rbfA | SHE96909.1 | SAMN05444320_103328 | SAMN05444320_102121 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | Excalibur calcium-binding domain-containing protein. | 0.409 |
| rbfA | secY | SAMN05444320_103328 | SAMN05444320_10174 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.577 |
| secY | SHE96909.1 | SAMN05444320_10174 | SAMN05444320_102121 | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | Excalibur calcium-binding domain-containing protein. | 0.408 |
| secY | guaA | SAMN05444320_10174 | SAMN05444320_1019 | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.479 |
| secY | rbfA | SAMN05444320_10174 | SAMN05444320_103328 | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.577 |